J4_1EUQ_001

3D structure

PDB id

1EUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITOR

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AUCG*CAC*GCAGC*GU

Length

14 nucleotides

Bulged bases

1EUQ|1|B|U|908, 1EUQ|1|B|G|948

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_1EUQ_001 not in the Motif Atlas

Homologous match to J4_1QTQ_001

Geometric discrepancy: 0.2446

The information below is about J4_1QTQ_001

Detailed Annotation

tRNA junction

Broad Annotation

No text annotation

Motif group

J4_36296.3

Basepair signature

cWW-F-cWW-cWW-F-F-F-cWW

Number of instances in this motif group

5

Unit IDs

1EUQ|1|B|A|907
1EUQ|1|B|U|908
1EUQ|1|B|C|909
1EUQ|1|B|G|910
*
1EUQ|1|B|C|925
1EUQ|1|B|A|926
1EUQ|1|B|C|927
*
1EUQ|1|B|G|943
1EUQ|1|B|C|944
1EUQ|1|B|A|945
1EUQ|1|B|G|948
1EUQ|1|B|C|949
*
1EUQ|1|B|G|965
1EUQ|1|B|U|966

Current chains

Chain B

GLUTAMINYL TRNA

Nearby chains

Chain A

GLUTAMINYL-TRNA SYNTHETASE