J4_1G59_002

3D structure

PDB id

1G59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

GLUTAMYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(GLU).

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

AUCG*CGC*GAAACG*CU

Length

15 nucleotides

Bulged bases

1G59|1|D|U|508, 1G59|1|D|C|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_1G59_002 not in the Motif Atlas

Homologous match to J4_1N78_001

Geometric discrepancy: 0.0734

The information below is about J4_1N78_001

Detailed Annotation

tRNA junction

Broad Annotation

No text annotation

Motif group

J4_95067.1

Basepair signature

cWW-F-cWW-cWW-cHS-F-cWW-cWW

Number of instances in this motif group

48

Unit IDs

1G59|1|D|A|507
1G59|1|D|U|508
1G59|1|D|C|509
1G59|1|D|G|510
*
1G59|1|D|C|525
1G59|1|D|G|526
1G59|1|D|C|527
*
1G59|1|D|G|543
1G59|1|D|A|544
1G59|1|D|A|545
1G59|1|D|A|546
1G59|1|D|C|548
1G59|1|D|G|549
*
1G59|1|D|C|565
1G59|1|D|U|566

Current chains

Chain D

TRNA(GLU)

Nearby chains

Chain C

GLUTAMYL-TRNA SYNTHETASE