J4_1N36_003
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CGUAAAGGG*CGAAAG*CCCUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 1N36|1|A|A|572, 1N36|1|A|G|576, 1N36|1|A|A|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1N36|1|A|C|569
1N36|1|A|G|570
1N36|1|A|U|571
1N36|1|A|A|572
1N36|1|A|A|573
1N36|1|A|A|574
1N36|1|A|G|575
1N36|1|A|G|576
1N36|1|A|G|577
*
1N36|1|A|C|764
1N36|1|A|G|765
1N36|1|A|A|766
1N36|1|A|A|767
1N36|1|A|A|768
1N36|1|A|G|769
*
1N36|1|A|C|810
1N36|1|A|C|811
1N36|1|A|C|812
1N36|1|A|U|813
1N36|1|A|A|814
1N36|1|A|A|815
1N36|1|A|A|816
1N36|1|A|C|817
1N36|1|A|G|818
1N36|1|A|A|819
1N36|1|A|U|820
1N36|1|A|G|821
*
1N36|1|A|C|879
1N36|1|A|C|880
1N36|1|A|G|881
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain O
- 30S RIBOSOMAL PROTEIN S15
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
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