3D structure

PDB id
1NKW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GAC*GACAG*CACC*GC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1NKW|1|0|G|1361
1NKW|1|0|A|1362
1NKW|1|0|C|1363
*
1NKW|1|0|G|1394
1NKW|1|0|A|1395
1NKW|1|0|C|1396
1NKW|1|0|A|1397
1NKW|1|0|G|1398
*
1NKW|1|0|C|1415
1NKW|1|0|A|1416
1NKW|1|0|C|1417
1NKW|1|0|C|1418
*
1NKW|1|0|G|1613
1NKW|1|0|C|1614

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain R
50S ribosomal protein L23

Coloring options:

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