J4_1NKW_004

3D structure

PDB id

1NKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AUG*UUGGU*AUCGGGAG*CGAAGU

Length

22 nucleotides

Bulged bases

1NKW|1|0|U|1459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NKW|1|0|A|1458
1NKW|1|0|U|1459
1NKW|1|0|G|1460
*
1NKW|1|0|U|1481
1NKW|1|0|U|1482
1NKW|1|0|G|1483
1NKW|1|0|G|1484
1NKW|1|0|U|1485
*
1NKW|1|0|A|1538
1NKW|1|0|U|1539
1NKW|1|0|C|1540
1NKW|1|0|G|1541
1NKW|1|0|G|1542
1NKW|1|0|G|1543
1NKW|1|0|A|1544
1NKW|1|0|G|1545
*
1NKW|1|0|C|1558
1NKW|1|0|G|1559
1NKW|1|0|A|1560
1NKW|1|0|A|1561
1NKW|1|0|G|1562
1NKW|1|0|U|1563

Current chains

Chain 0

23S ribosomal RNA

Nearby chains