J4_1NWY_007

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAAGG*CUUGAC*GGG*CGG

Length

18 nucleotides

Bulged bases

1NWY|1|0|A|2265, 1NWY|1|0|A|2267, 1NWY|1|0|G|2324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1NWY|1|0|C|2264
1NWY|1|0|A|2265
1NWY|1|0|A|2266
1NWY|1|0|A|2267
1NWY|1|0|G|2268
1NWY|1|0|G|2269
*
1NWY|1|0|C|2321
1NWY|1|0|U|2322
1NWY|1|0|U|2323
1NWY|1|0|G|2324
1NWY|1|0|A|2325
1NWY|1|0|C|2326
*
1NWY|1|0|G|2349
1NWY|1|0|G|2350
1NWY|1|0|G|2351
*
1NWY|1|0|C|2360
1NWY|1|0|G|2361
1NWY|1|0|G|2362

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 1

ribosomal protein L33

Chain 3

ribosomal protein L35

Chain U

ribosomal protein L27