J4_1O0B_001
3D structure
- PDB id
- 1O0B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- AUCG*CAC*GCAUUCC*GU
- Length
- 16 nucleotides
- Bulged bases
- 1O0B|1|B|U|908, 1O0B|1|B|U|946, 1O0B|1|B|U|947, 1O0B|1|B|C|948
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_1O0B_001 not in the Motif Atlas
- Homologous match to J4_1QTQ_001
- Geometric discrepancy: 0.1059
- The information below is about J4_1QTQ_001
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_36296.3
- Basepair signature
- cWW-F-cWW-cWW-F-F-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
1O0B|1|B|A|907
1O0B|1|B|U|908
1O0B|1|B|C|909
1O0B|1|B|G|910
*
1O0B|1|B|C|925
1O0B|1|B|A|926
1O0B|1|B|C|927
*
1O0B|1|B|G|943
1O0B|1|B|C|944
1O0B|1|B|A|945
1O0B|1|B|U|946
1O0B|1|B|U|947
1O0B|1|B|C|948
1O0B|1|B|C|949
*
1O0B|1|B|G|965
1O0B|1|B|U|966
Current chains
- Chain B
- Glutaminyl tRNA
Nearby chains
- Chain A
- Glutaminyl-tRNA synthetase
Coloring options: