J4_1U9S_002

3D structure

PDB id

1U9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P of the A-type

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CACAGAGAAGAGAC*GGUGAAACG*CG*CACG

Length

29 nucleotides

Bulged bases

1U9S|1|A|G|128, 1U9S|1|A|A|220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

RNase P

Broad Annotation

No text annotation

Motif group

J4_12209.1

Basepair signature

cWW-F-F-F-cWW-tWH-F-cWW-F-F-F-tWS-tWH-F-F-F-F-F-cSH-cWW-F

Number of instances in this motif group

1

Unit IDs

1U9S|1|A|C|119
1U9S|1|A|A|120
1U9S|1|A|C|121
1U9S|1|A|A|122
1U9S|1|A|G|123
1U9S|1|A|A|124
1U9S|1|A|G|125
1U9S|1|A|A|126
1U9S|1|A|A|127
1U9S|1|A|G|128
1U9S|1|A|A|129
1U9S|1|A|G|130
1U9S|1|A|A|131
1U9S|1|A|C|132
*
1U9S|1|A|G|168
1U9S|1|A|G|169
1U9S|1|A|U|170
1U9S|1|A|G|171
1U9S|1|A|A|172
1U9S|1|A|A|173
1U9S|1|A|A|174
1U9S|1|A|C|175
1U9S|1|A|G|176
*
1U9S|1|A|C|194
1U9S|1|A|G|195
*
1U9S|1|A|C|219
1U9S|1|A|A|220
1U9S|1|A|C|221
1U9S|1|A|G|222

Current chains

Chain A

RIBONUCLEASE P

Nearby chains