3D structure

PDB id
1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGAAAA*UC*GAAU*AG
Length
14 nucleotides
Bulged bases
1VW3|1|A|G|1304, 1VW3|1|A|A|1305, 1VW3|1|A|A|1307, 1VW3|1|A|A|1599
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1VW3|1|A|C|1303
1VW3|1|A|G|1304
1VW3|1|A|A|1305
1VW3|1|A|A|1306
1VW3|1|A|A|1307
1VW3|1|A|A|1308
*
1VW3|1|A|U|1325
1VW3|1|A|C|1326
*
1VW3|1|A|G|1597
1VW3|1|A|A|1598
1VW3|1|A|A|1599
1VW3|1|A|U|1600
*
1VW3|1|A|A|1909
1VW3|1|A|G|1910

Current chains

Chain A
21S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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