Loop J4_1Z58

3D structure

PDB id: 1Z58 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of a complex of the ribosome large subunit with rapamycin
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å

Loop

Sequence: GGUUC*GGAAAGUCGGGAC*GACAGCAGGUCAAGAUUCCUGCACCGAU*AUUGCCCGUAC
Length: 57 nucleotides
Bulged bases: 1Z58|1|2|U|1409
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

1Z58|1|2|G|1323
1Z58|1|2|G|1324
1Z58|1|2|U|1325
1Z58|1|2|U|1326
1Z58|1|2|C|1327
*
1Z58|1|2|G|1351
1Z58|1|2|G|1352
1Z58|1|2|A|1353
1Z58|1|2|A|1354
1Z58|1|2|A|1355
1Z58|1|2|G|1356
1Z58|1|2|U|1357
1Z58|1|2|C|1358
1Z58|1|2|G|1359
1Z58|1|2|G|1360
1Z58|1|2|G|1361
1Z58|1|2|A|1362
1Z58|1|2|C|1363
*
1Z58|1|2|G|1394
1Z58|1|2|A|1395
1Z58|1|2|C|1396
1Z58|1|2|A|1397
1Z58|1|2|G|1398
1Z58|1|2|C|1399
1Z58|1|2|A|1400
1Z58|1|2|G|1401
1Z58|1|2|G|1402
1Z58|1|2|U|1403
1Z58|1|2|C|1404
1Z58|1|2|A|1405
1Z58|1|2|A|1406
1Z58|1|2|G|1407
1Z58|1|2|A|1408
1Z58|1|2|U|1409
1Z58|1|2|U|1410
1Z58|1|2|C|1411
1Z58|1|2|C|1412
1Z58|1|2|U|1413
1Z58|1|2|G|1414
1Z58|1|2|C|1415
1Z58|1|2|A|1416
1Z58|1|2|C|1417
1Z58|1|2|C|1418
1Z58|1|2|G|1419
1Z58|1|2|A|1420
1Z58|1|2|U|1421
*
1Z58|1|2|A|1610
1Z58|1|2|U|1611
1Z58|1|2|U|1612
1Z58|1|2|G|1613
1Z58|1|2|C|1614
1Z58|1|2|C|1615
1Z58|1|2|C|1616
1Z58|1|2|G|1617
1Z58|1|2|U|1618
1Z58|1|2|A|1619
1Z58|1|2|C|1620

Current chains

Chain 2: 23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

J4_1Z58_003