J4_28LN_008
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 28LN|1|B5|C|2436
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|G|2405
28LN|1|B5|G|2406
28LN|1|B5|U|2407
28LN|1|B5|U|2408
28LN|1|B5|C|2409
*
28LN|1|B5|G|2433
28LN|1|B5|G|2434
28LN|1|B5|U|2435
28LN|1|B5|C|2436
28LN|1|B5|A|2437
28LN|1|B5|G|2438
*
28LN|1|B5|U|2537
28LN|1|B5|C|2538
*
28LN|1|B5|G|2776
28LN|1|B5|G|2777
28LN|1|B5|C|2778
28LN|1|B5|C|2779
28LN|1|B5|G|2780
28LN|1|B5|U|2781
28LN|1|B5|A|2782
28LN|1|B5|C|2783
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BR
- 60S ribosomal protein L19
- Chain BX
- 60S ribosomal protein L23a
- Chain Bg
- 60S ribosomal protein L34
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Large ribosomal subunit protein eL37
- Chain Bk
- 60S ribosomal protein L38
- Chain Bl
- 60S ribosomal protein L39
Coloring options: