J4_28LN_010

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

28LN|1|B5|A|2695

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|2617
28LN|1|B5|G|2618
*
28LN|1|B5|U|2636
28LN|1|B5|G|2637
28LN|1|B5|U|2638
28LN|1|B5|G|2639
28LN|1|B5|A|2640
28LN|1|B5|A|2641
*
28LN|1|B5|U|2691
28LN|1|B5|G|2692
28LN|1|B5|G|2693
28LN|1|B5|A|2694
28LN|1|B5|A|2695
28LN|1|B5|A|2696
28LN|1|B5|G|2697
*
28LN|1|B5|U|2717
28LN|1|B5|C|2718

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

60S ribosomal protein L19

Chain BU

60S ribosomal protein L22

Chain Bg

60S ribosomal protein L34

Chain Bk

60S ribosomal protein L38