J4_28UL_002

3D structure

PDB id

28UL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational ground state mutation in SSU-h41, with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

28UL|1|A|C|183, 28UL|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UL|1|A|G|142
28UL|1|A|A|143
28UL|1|A|G|144
*
28UL|1|A|C|178
28UL|1|A|A|179
28UL|1|A|U|180
28UL|1|A|A|181
28UL|1|A|A|182
28UL|1|A|C|183
28UL|1|A|G|184
*
28UL|1|A|C|193
28UL|1|A|C|194
28UL|1|A|A|195
28UL|1|A|A|196
28UL|1|A|A|197
28UL|1|A|G|198
*
28UL|1|A|U|219
28UL|1|A|G|220
28UL|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20