J4_28UN_002

3D structure

PDB id

28UN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

28UN|1|A|C|183, 28UN|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UN|1|A|G|142
28UN|1|A|A|143
28UN|1|A|G|144
*
28UN|1|A|C|178
28UN|1|A|A|179
28UN|1|A|U|180
28UN|1|A|A|181
28UN|1|A|A|182
28UN|1|A|C|183
28UN|1|A|G|184
*
28UN|1|A|C|193
28UN|1|A|C|194
28UN|1|A|A|195
28UN|1|A|A|196
28UN|1|A|A|197
28UN|1|A|G|198
*
28UN|1|A|U|219
28UN|1|A|G|220
28UN|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20