J4_2AAR_006

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GCAAUCUCA*UC*GCGCAGUGAAUAGG*CGC

Length

28 nucleotides

Bulged bases

2AAR|1|0|G|1749, 2AAR|1|0|G|1754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2AAR|1|0|G|1691
2AAR|1|0|C|1692
2AAR|1|0|A|1693
2AAR|1|0|A|1694
2AAR|1|0|U|1695
2AAR|1|0|C|1696
2AAR|1|0|U|1697
2AAR|1|0|C|1698
2AAR|1|0|A|1699
*
2AAR|1|0|U|1723
2AAR|1|0|C|1724
*
2AAR|1|0|G|1742
2AAR|1|0|C|1743
2AAR|1|0|G|1744
2AAR|1|0|C|1745
2AAR|1|0|A|1746
2AAR|1|0|G|1747
2AAR|1|0|U|1748
2AAR|1|0|G|1749
2AAR|1|0|A|1750
2AAR|1|0|A|1751
2AAR|1|0|U|1752
2AAR|1|0|A|1753
2AAR|1|0|G|1754
2AAR|1|0|G|1755
*
2AAR|1|0|C|1971
2AAR|1|0|G|1972
2AAR|1|0|C|1973

Current chains

Chain 0

23S ribosomal RNA

Nearby chains