J4_2CV0_001

3D structure

PDB id

2CV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu) and L-glutamate

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

AUCG*CGC*GAAACG*CU

Length

15 nucleotides

Bulged bases

2CV0|1|C|U|508, 2CV0|1|C|C|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_2CV0_001 not in the Motif Atlas

Homologous match to J4_1N78_001

Geometric discrepancy: 0.0456

The information below is about J4_1N78_001

Detailed Annotation

tRNA junction

Broad Annotation

No text annotation

Motif group

J4_95067.1

Basepair signature

cWW-F-cWW-cWW-cHS-F-cWW-cWW

Number of instances in this motif group

48

Unit IDs

2CV0|1|C|A|507
2CV0|1|C|U|508
2CV0|1|C|C|509
2CV0|1|C|G|510
*
2CV0|1|C|C|525
2CV0|1|C|G|526
2CV0|1|C|C|527
*
2CV0|1|C|G|543
2CV0|1|C|A|544
2CV0|1|C|A|545
2CV0|1|C|A|546
2CV0|1|C|C|548
2CV0|1|C|G|549
*
2CV0|1|C|C|565
2CV0|1|C|U|566

Current chains

Chain C

tRNA

Nearby chains

Chain A

glutamyl-tRNA synthetase