J4_30RA_007

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

30RA|1|a|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|C|601
30RA|1|a|A|602
30RA|1|a|A|603
30RA|1|a|G|604
*
30RA|1|a|C|624
30RA|1|a|G|625
30RA|1|a|A|626
30RA|1|a|A|627
30RA|1|a|G|628
*
30RA|1|a|C|635
30RA|1|a|G|636
30RA|1|a|A|637
30RA|1|a|G|638
*
30RA|1|a|C|650
30RA|1|a|G|651
30RA|1|a|U|652
30RA|1|a|U|653
30RA|1|a|A|654
30RA|1|a|A|655
30RA|1|a|G|656

Current chains

Chain a

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL35

Chain e

Large ribosomal subunit protein uL4

Chain k

Large ribosomal subunit protein uL15