J4_30RB_005

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

30RB|1|a|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|C|268
30RB|1|a|C|269
*
30RB|1|a|G|370
30RB|1|a|A|371
30RB|1|a|G|372
30RB|1|a|U|373
30RB|1|a|A|374
30RB|1|a|G|375
*
30RB|1|a|U|399
30RB|1|a|G|400
30RB|1|a|A|401
30RB|1|a|A|402
30RB|1|a|U|403
30RB|1|a|A|404
30RB|1|a|U|405
30RB|1|a|G|406
*
30RB|1|a|C|421
30RB|1|a|A|422
30RB|1|a|A|423
30RB|1|a|G|424

Current chains

Chain a

23S rRNA

Nearby chains

Chain h

Large ribosomal subunit protein bL9

Chain w

Large ribosomal subunit protein bL28