J4_7A0S_001

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CC*GAGUAG*UGAAUCCG*CAAG

Length

20 nucleotides

Bulged bases

7A0S|1|X|C|418

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_45801.6

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|C|245
7A0S|1|X|C|246
*
7A0S|1|X|G|383
7A0S|1|X|A|384
7A0S|1|X|G|385
7A0S|1|X|U|386
7A0S|1|X|A|387
7A0S|1|X|G|388
*
7A0S|1|X|U|412
7A0S|1|X|G|413
7A0S|1|X|A|414
7A0S|1|X|A|415
7A0S|1|X|U|416
7A0S|1|X|C|417
7A0S|1|X|C|418
7A0S|1|X|G|419
*
7A0S|1|X|C|434
7A0S|1|X|A|435
7A0S|1|X|A|436
7A0S|1|X|G|437

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain U

50S ribosomal protein L28