J4_30RB_007

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

30RB|1|a|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|C|601
30RB|1|a|A|602
30RB|1|a|A|603
30RB|1|a|G|604
*
30RB|1|a|C|624
30RB|1|a|G|625
30RB|1|a|A|626
30RB|1|a|A|627
30RB|1|a|G|628
*
30RB|1|a|C|635
30RB|1|a|G|636
30RB|1|a|A|637
30RB|1|a|G|638
*
30RB|1|a|C|650
30RB|1|a|G|651
30RB|1|a|U|652
30RB|1|a|U|653
30RB|1|a|A|654
30RB|1|a|A|655
30RB|1|a|G|656

Current chains

Chain a

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL35

Chain e

Large ribosomal subunit protein uL4

Chain k

Large ribosomal subunit protein uL15