J4_30RB_012

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|A|1772
30RB|1|a|A|1773
30RB|1|a|C|1774
30RB|1|a|U|1775
30RB|1|a|G|1776
*
30RB|1|a|C|1788
30RB|1|a|A|1789
30RB|1|a|C|1790
30RB|1|a|A|1791
30RB|1|a|G|1792
*
30RB|1|a|U|1827
30RB|1|a|G|1828
30RB|1|a|A|1829
30RB|1|a|C|1830
*
30RB|1|a|G|1975
30RB|1|a|U|1976
30RB|1|a|A|1977
30RB|1|a|A|1978
30RB|1|a|U|1979

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2