J4_3BBX_002
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GGAAG*CGCG*CAG*CGUAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3BBX_002 not in the Motif Atlas
- Homologous match to J4_5J7L_019
- Geometric discrepancy: 0.1223
- The information below is about J4_5J7L_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
3BBX|1|B|G|297
3BBX|1|B|G|298
3BBX|1|B|A|299
3BBX|1|B|A|300
3BBX|1|B|G|301
*
3BBX|1|B|C|316
3BBX|1|B|G|317
3BBX|1|B|C|318
3BBX|1|B|G|319
*
3BBX|1|B|C|323
3BBX|1|B|A|324
3BBX|1|B|G|325
*
3BBX|1|B|C|337
3BBX|1|B|G|338
3BBX|1|B|U|339
3BBX|1|B|A|340
3BBX|1|B|C|341
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain U
- 50S ribosomal protein L24
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