J4_3BBX_004

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

GGGUUC*GGUGAG*CU*AAUCGUACC

Length

23 nucleotides

Bulged bases

3BBX|1|B|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3BBX|1|B|G|1309
3BBX|1|B|G|1310
3BBX|1|B|G|1311
3BBX|1|B|U|1312
3BBX|1|B|U|1313
3BBX|1|B|C|1314
*
3BBX|1|B|G|1338
3BBX|1|B|G|1339
3BBX|1|B|U|1340
3BBX|1|B|G|1341
3BBX|1|B|A|1342
3BBX|1|B|G|1343
*
3BBX|1|B|C|1404
3BBX|1|B|U|1405
*
3BBX|1|B|A|1597
3BBX|1|B|A|1598
3BBX|1|B|U|1599
3BBX|1|B|C|1600
3BBX|1|B|G|1601
3BBX|1|B|U|1602
3BBX|1|B|A|1603
3BBX|1|B|C|1604
3BBX|1|B|C|1605

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23