J4_3BBX_006

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3BBX|1|B|A|1772
3BBX|1|B|A|1773
3BBX|1|B|C|1774
3BBX|1|B|U|1775
3BBX|1|B|G|1776
*
3BBX|1|B|C|1788
3BBX|1|B|A|1789
3BBX|1|B|C|1790
3BBX|1|B|A|1791
3BBX|1|B|G|1792
*
3BBX|1|B|U|1827
3BBX|1|B|G|1828
3BBX|1|B|A|1829
3BBX|1|B|C|1830
*
3BBX|1|B|G|1975
3BBX|1|B|U|1976
3BBX|1|B|A|1977
3BBX|1|B|A|1978
3BBX|1|B|U|1979

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2