J4_3CCE_001

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CC*GAGUAG*CGAAUAAC*GAAG

Length

20 nucleotides

Bulged bases

3CCE|1|0|A|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCE_001 not in the Motif Atlas

Homologous match to J4_4V9F_001

Geometric discrepancy: 0.035

The information below is about J4_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_45801.6

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW

Number of instances in this motif group

7

Unit IDs

3CCE|1|0|C|239
3CCE|1|0|C|240
*
3CCE|1|0|G|379
3CCE|1|0|A|380
3CCE|1|0|G|381
3CCE|1|0|U|382
3CCE|1|0|A|383
3CCE|1|0|G|384
*
3CCE|1|0|C|405
3CCE|1|0|G|406
3CCE|1|0|A|407
3CCE|1|0|A|408
3CCE|1|0|U|409
3CCE|1|0|A|410
3CCE|1|0|A|411
3CCE|1|0|C|412
*
3CCE|1|0|G|428
3CCE|1|0|A|429
3CCE|1|0|A|430
3CCE|1|0|G|431

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e