J4_3CCS_001

3D structure

PDB id

3CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CC*GAGUAG*CGAAUAAC*GAAG

Length

20 nucleotides

Bulged bases

3CCS|1|0|A|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCS_001 not in the Motif Atlas

Homologous match to J4_4V9F_001

Geometric discrepancy: 0.0399

The information below is about J4_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_45801.6

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW

Number of instances in this motif group

7

Unit IDs

3CCS|1|0|C|239
3CCS|1|0|C|240
*
3CCS|1|0|G|379
3CCS|1|0|A|380
3CCS|1|0|G|381
3CCS|1|0|U|382
3CCS|1|0|A|383
3CCS|1|0|G|384
*
3CCS|1|0|C|405
3CCS|1|0|G|406
3CCS|1|0|A|407
3CCS|1|0|A|408
3CCS|1|0|U|409
3CCS|1|0|A|410
3CCS|1|0|A|411
3CCS|1|0|C|412
*
3CCS|1|0|G|428
3CCS|1|0|A|429
3CCS|1|0|A|430
3CCS|1|0|G|431

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e