J4_3CCS_008

3D structure

PDB id

3CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUG*CG*CUUAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

3CCS|1|0|U|2012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCS_008 not in the Motif Atlas

Homologous match to J4_4V9F_008

Geometric discrepancy: 0.0625

The information below is about J4_4V9F_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_93343.1

Basepair signature

cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F

Number of instances in this motif group

4

Unit IDs

3CCS|1|0|C|1889
3CCS|1|0|U|1890
3CCS|1|0|G|1891
*
3CCS|1|0|C|1946
3CCS|1|0|G|1947
*
3CCS|1|0|C|1965
3CCS|1|0|U|1966
3CCS|1|0|U|1967
3CCS|1|0|A|1968
3CCS|1|0|A|1969
3CCS|1|0|G|1970
3CCS|1|0|G|1971
3CCS|1|0|U|1972
3CCS|1|0|A|1973
3CCS|1|0|G|1974
*
3CCS|1|0|U|2008
3CCS|1|0|G|2009
3CCS|1|0|A|2010
3CCS|1|0|A|2011
3CCS|1|0|U|2012
3CCS|1|0|G|2013

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P