J4_3CCU_001

3D structure

PDB id

3CCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CC*GAGUAG*CGAAUAAC*GAAG

Length

20 nucleotides

Bulged bases

3CCU|1|0|A|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3CCU_001 not in the Motif Atlas

Homologous match to J4_4V9F_001

Geometric discrepancy: 0.0321

The information below is about J4_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_94698.1

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW

Number of instances in this motif group

10

Unit IDs

3CCU|1|0|C|239
3CCU|1|0|C|240
*
3CCU|1|0|G|379
3CCU|1|0|A|380
3CCU|1|0|G|381
3CCU|1|0|U|382
3CCU|1|0|A|383
3CCU|1|0|G|384
*
3CCU|1|0|C|405
3CCU|1|0|G|406
3CCU|1|0|A|407
3CCU|1|0|A|408
3CCU|1|0|U|409
3CCU|1|0|A|410
3CCU|1|0|A|411
3CCU|1|0|C|412
*
3CCU|1|0|G|428
3CCU|1|0|A|429
3CCU|1|0|A|430
3CCU|1|0|G|431

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain M

50S ribosomal protein L15e