J4_3EPH_002
3D structure
- PDB id
- 3EPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: Insight into tRNA recognition and reaction mechanism
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GUAUGG*CAG*UUGGUCC*GUGC
- Length
- 20 nucleotides
- Bulged bases
- 3EPH|1|F|U|8, 3EPH|1|F|U|47, 3EPH|1|F|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3EPH|1|F|G|5
3EPH|1|F|U|6
3EPH|1|F|A|7
3EPH|1|F|U|8
3EPH|1|F|G|9
3EPH|1|F|G|10
*
3EPH|1|F|C|25
3EPH|1|F|A|26
3EPH|1|F|G|27
*
3EPH|1|F|U|43
3EPH|1|F|U|44
3EPH|1|F|G|45
3EPH|1|F|G|46
3EPH|1|F|U|47
3EPH|1|F|C|48
3EPH|1|F|C|49
*
3EPH|1|F|G|65
3EPH|1|F|U|66
3EPH|1|F|G|67
3EPH|1|F|C|68
Current chains
- Chain F
- tRNA
Nearby chains
- Chain B
- tRNA isopentenyltransferase
Coloring options: