J4_3F2X_002

3D structure

PDB id

3F2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the FMN riboswitch bound to FMN, Cs+ soak.

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GG*CGAA*UUGAU*AACC

Length

15 nucleotides

Bulged bases

3F2X|1|X|U|61

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

FMN riboswitch

Broad Annotation

No text annotation

Motif group

J4_36540.1

Basepair signature

cWW-cWW-F-F-F-cWW-F-cWW-F-F

Number of instances in this motif group

2

Unit IDs

3F2X|1|X|G|32
3F2X|1|X|G|33
*
3F2X|1|X|C|46
3F2X|1|X|G|47
3F2X|1|X|A|48
3F2X|1|X|A|49
*
3F2X|1|X|U|60
3F2X|1|X|U|61
3F2X|1|X|G|62
3F2X|1|X|A|63
3F2X|1|X|U|64
*
3F2X|1|X|A|80
3F2X|1|X|A|81
3F2X|1|X|C|82
3F2X|1|X|C|83

Current chains

Chain X

FMN riboswitch

Nearby chains