Loop J4_3J2C

3D structure

PDB id: 3J2C (explore in PDB, NAKB, or RNA 3D Hub)
Description: Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
Experimental method: ELECTRON MICROSCOPY
Resolution: 13.2 Å

Loop

Sequence: GUCGUCAGC*GCGCAACCCUUAU*AGACUGCCA*UGGAGGAAGGUGGGGAUGACGUC
Length: 54 nucleotides
Bulged bases: 3J2C|1|M|U|1183
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

3J2C|1|M|G|1061
3J2C|1|M|U|1062
3J2C|1|M|C|1063
3J2C|1|M|G|1064
3J2C|1|M|U|1065
3J2C|1|M|C|1066
3J2C|1|M|A|1067
3J2C|1|M|G|1068
3J2C|1|M|C|1069
*
3J2C|1|M|G|1106
3J2C|1|M|C|1107
3J2C|1|M|G|1108
3J2C|1|M|C|1109
3J2C|1|M|A|1110
3J2C|1|M|A|1111
3J2C|1|M|C|1112
3J2C|1|M|C|1113
3J2C|1|M|C|1114
3J2C|1|M|U|1115
3J2C|1|M|U|1116
3J2C|1|M|A|1117
3J2C|1|M|U|1118
*
3J2C|1|M|A|1155
3J2C|1|M|G|1156
3J2C|1|M|A|1157
3J2C|1|M|C|1158
3J2C|1|M|U|1159
3J2C|1|M|G|1160
3J2C|1|M|C|1161
3J2C|1|M|C|1162
3J2C|1|M|A|1163
*
3J2C|1|M|U|1173
3J2C|1|M|G|1174
3J2C|1|M|G|1175
3J2C|1|M|A|1176
3J2C|1|M|G|1177
3J2C|1|M|G|1178
3J2C|1|M|A|1179
3J2C|1|M|A|1180
3J2C|1|M|G|1181
3J2C|1|M|G|1182
3J2C|1|M|U|1183
3J2C|1|M|G|1184
3J2C|1|M|G|1185
3J2C|1|M|G|1186
3J2C|1|M|G|1187
3J2C|1|M|A|1188
3J2C|1|M|U|1189
3J2C|1|M|G|1190
3J2C|1|M|A|1191
3J2C|1|M|C|1192
3J2C|1|M|G|1193
3J2C|1|M|U|1194
3J2C|1|M|C|1195

Current chains

Chain M: 16S rRNA head domain

Nearby chains

Chain N: Small subunit ribosomal RNA; SSU rRNA

J4_3J2C_002