J4_3J2G_004

3D structure

PDB id

3J2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

16.5 Å

Loop

Sequence

UGGA*UACAAUG*CGUAGUCC*GUCGGAA

Length

26 nucleotides

Bulged bases

3J2G|1|N|A|1238, 3J2G|1|N|U|1240, 3J2G|1|N|U|1298, 3J2G|1|N|C|1302

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2G|1|N|U|943
3J2G|1|N|G|944
3J2G|1|N|G|945
3J2G|1|N|A|946
*
3J2G|1|N|U|1235
3J2G|1|N|A|1236
3J2G|1|N|C|1237
3J2G|1|N|A|1238
3J2G|1|N|A|1239
3J2G|1|N|U|1240
3J2G|1|N|G|1241
*
3J2G|1|N|C|1296
3J2G|1|N|G|1297
3J2G|1|N|U|1298
3J2G|1|N|A|1299
3J2G|1|N|G|1300
3J2G|1|N|U|1301
3J2G|1|N|C|1302
3J2G|1|N|C|1303
*
3J2G|1|N|G|1334
3J2G|1|N|U|1335
3J2G|1|N|C|1336
3J2G|1|N|G|1337
3J2G|1|N|G|1338
3J2G|1|N|A|1339
3J2G|1|N|A|1340

Current chains

Chain N

16S rRNA

Nearby chains