J4_3J73_002
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGUUC*GGUCAG*UCCG*CGGGCCGUAC
- Length
- 25 nucleotides
- Bulged bases
- 3J73|1|5|U|2408, 3J73|1|5|U|2436, 3J73|1|5|C|2437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J73|1|5|G|2406
3J73|1|5|G|2407
3J73|1|5|U|2408
3J73|1|5|U|2409
3J73|1|5|C|2410
*
3J73|1|5|G|2434
3J73|1|5|G|2435
3J73|1|5|U|2436
3J73|1|5|C|2437
3J73|1|5|A|2438
3J73|1|5|G|2439
*
3J73|1|5|U|2538
3J73|1|5|C|2539
3J73|1|5|C|2540
3J73|1|5|G|2541
*
3J73|1|5|C|2775
3J73|1|5|G|2776
3J73|1|5|G|2777
3J73|1|5|G|2778
3J73|1|5|C|2779
3J73|1|5|C|2780
3J73|1|5|G|2781
3J73|1|5|U|2782
3J73|1|5|A|2783
3J73|1|5|C|2784
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Sec61 alpha subunit
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain X
- Ribosomal protein uL23
- Chain g
- Ribosomal protein eL34
- Chain j
- Ribosomal protein eL37
- Chain k
- Ribosomal protein eL38
- Chain l
- Ribosomal protein eL39
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