J4_3J74_001

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCUCC*GGCCGGGCCAC*GAGGGGCCACGCGCGCGUC*GACGGCGGAGCGA

Length

48 nucleotides

Bulged bases

3J74|1|5|C|1237, 3J74|1|5|G|1273

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J74|1|5|U|980
3J74|1|5|C|981
3J74|1|5|U|982
3J74|1|5|C|983
3J74|1|5|C|984
*
3J74|1|5|G|1069
3J74|1|5|G|1070
3J74|1|5|C|1071
3J74|1|5|C|1072
3J74|1|5|G|1073
3J74|1|5|G|1074
3J74|1|5|G|1075
3J74|1|5|C|1076
3J74|1|5|C|1077
3J74|1|5|A|1078
3J74|1|5|C|1079
*
3J74|1|5|G|1221
3J74|1|5|A|1222
3J74|1|5|G|1232
3J74|1|5|G|1233
3J74|1|5|G|1234
3J74|1|5|G|1235
3J74|1|5|C|1236
3J74|1|5|C|1237
3J74|1|5|A|1238
3J74|1|5|C|1239
3J74|1|5|G|1240
3J74|1|5|C|1241
3J74|1|5|G|1242
3J74|1|5|C|1243
3J74|1|5|G|1244
3J74|1|5|C|1245
3J74|1|5|G|1246
3J74|1|5|U|1247
3J74|1|5|C|1248
*
3J74|1|5|G|1262
3J74|1|5|A|1263
3J74|1|5|C|1264
3J74|1|5|G|1265
3J74|1|5|G|1266
3J74|1|5|C|1267
3J74|1|5|G|1268
3J74|1|5|G|1269
3J74|1|5|A|1270
3J74|1|5|G|1271
3J74|1|5|C|1272
3J74|1|5|G|1273
3J74|1|5|A|1274

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain E

Ribosomal protein eL6

Chain F

Ribosomal protein uL30