J4_3J74_005
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUGCAUGUCUAAG*CUGCGAAUGGC*GAG*CACAUCCAAGGAAGGCAGCAG
- Length
- 49 nucleotides
- Bulged bases
- 3J74|1|S2|U|55, 3J74|1|S2|A|92, 3J74|1|S2|A|464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J74|1|S2|C|49
3J74|1|S2|A|50
3J74|1|S2|U|51
3J74|1|S2|G|52
3J74|1|S2|C|53
3J74|1|S2|A|54
3J74|1|S2|U|55
3J74|1|S2|G|56
3J74|1|S2|U|57
3J74|1|S2|C|58
3J74|1|S2|U|59
3J74|1|S2|A|60
3J74|1|S2|A|61
3J74|1|S2|G|62
*
3J74|1|S2|C|86
3J74|1|S2|U|87
3J74|1|S2|G|88
3J74|1|S2|C|89
3J74|1|S2|G|90
3J74|1|S2|A|91
3J74|1|S2|A|92
3J74|1|S2|U|93
3J74|1|S2|G|94
3J74|1|S2|G|95
3J74|1|S2|C|96
*
3J74|1|S2|G|434
3J74|1|S2|A|435
3J74|1|S2|G|436
*
3J74|1|S2|C|457
3J74|1|S2|A|458
3J74|1|S2|C|459
3J74|1|S2|A|460
3J74|1|S2|U|461
3J74|1|S2|C|462
3J74|1|S2|C|463
3J74|1|S2|A|464
3J74|1|S2|A|465
3J74|1|S2|G|466
3J74|1|S2|G|467
3J74|1|S2|A|468
3J74|1|S2|A|469
3J74|1|S2|G|470
3J74|1|S2|G|471
3J74|1|S2|C|472
3J74|1|S2|A|473
3J74|1|S2|G|474
3J74|1|S2|C|475
3J74|1|S2|A|476
3J74|1|S2|G|477
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 4
- Eukaryotic elongation factor 2
- Chain SE
- Ribosomal protein eS4
- Chain SG
- Ribosomal protein eS6
- Chain SI
- Ribosomal protein eS8
- Chain SJ
- Ribosomal protein uS4
- Chain SY
- Ribosomal protein eS24
- Chain V
- Ribosomal protein uL14
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