J4_3J74_007
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAGCUCGUAG*UCAAGAACGAAAG*CCAUAAACGAUG*UU
- Length
- 37 nucleotides
- Bulged bases
- 3J74|1|S2|A|672, 3J74|1|S2|A|1083
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J74|1|S2|A|671
3J74|1|S2|A|672
3J74|1|S2|G|673
3J74|1|S2|C|674
3J74|1|S2|U|675
3J74|1|S2|C|676
3J74|1|S2|G|677
3J74|1|S2|U|678
3J74|1|S2|A|679
3J74|1|S2|G|680
*
3J74|1|S2|U|1025
3J74|1|S2|C|1026
3J74|1|S2|A|1027
3J74|1|S2|A|1028
3J74|1|S2|G|1029
3J74|1|S2|A|1030
3J74|1|S2|A|1031
3J74|1|S2|C|1032
3J74|1|S2|G|1033
3J74|1|S2|A|1034
3J74|1|S2|A|1035
3J74|1|S2|A|1036
3J74|1|S2|G|1037
*
3J74|1|S2|C|1078
3J74|1|S2|C|1079
3J74|1|S2|A|1080
3J74|1|S2|U|1081
3J74|1|S2|A|1082
3J74|1|S2|A|1083
3J74|1|S2|A|1084
3J74|1|S2|C|1085
3J74|1|S2|G|1086
3J74|1|S2|A|1087
3J74|1|S2|U|1088
3J74|1|S2|G|1089
*
3J74|1|S2|U|1160
3J74|1|S2|U|1161
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SL
- Ribosomal protein uS17
- Chain SN
- Ribosomal protein uS15
- Chain SO
- Ribosomal protein uS11
- Chain SW
- Ribosomal protein uS8
- Chain SX
- Ribosomal protein uS12
- Chain Sa
- Ribosomal protein eS26
- Chain n
- Ribosomal protein eL41
- Chain p
- Ribosomal protein eL43
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