J4_3J79_005
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*UU*AGUAAUU*AUUAUCC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J79|1|A|G|1829
3J79|1|A|G|1830
*
3J79|1|A|U|1848
3J79|1|A|U|1849
*
3J79|1|A|A|1972
3J79|1|A|G|1973
3J79|1|A|U|1974
3J79|1|A|A|1975
3J79|1|A|A|1976
3J79|1|A|U|1977
3J79|1|A|U|1978
*
3J79|1|A|A|1990
3J79|1|A|U|1991
3J79|1|A|U|1992
3J79|1|A|A|1993
3J79|1|A|U|1994
3J79|1|A|C|1995
3J79|1|A|C|1996
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain T
- 60S ribosomal protein eL19
- Chain X
- 60S ribosomal protein eL22
- Chain a
- 60S ribosomal protein eL34
- Chain d
- 60S ribosomal protein eL38
Coloring options: