J4_3J7P_004

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

3J7P|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|5|G|2618
3J7P|1|5|G|2619
*
3J7P|1|5|U|2637
3J7P|1|5|G|2638
3J7P|1|5|U|2639
3J7P|1|5|G|2640
3J7P|1|5|A|2641
3J7P|1|5|A|2642
*
3J7P|1|5|U|2692
3J7P|1|5|G|2693
3J7P|1|5|G|2694
3J7P|1|5|A|2695
3J7P|1|5|A|2696
3J7P|1|5|A|2697
3J7P|1|5|G|2698
*
3J7P|1|5|U|2718
3J7P|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain U

Ribosomal protein eL22

Chain g

Ribosomal protein eL34

Chain k

Ribosomal protein eL38