J4_3J8G_007

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GG*UU*ACGAG*UGAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3J8G_007 not in the Motif Atlas

Homologous match to J4_7A0S_007

Geometric discrepancy: 0.3717

The information below is about J4_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_91813.1

Basepair signature

cWW-cWW-F-tSH-cWW-F-F-F-cWW-F

Number of instances in this motif group

1

Unit IDs

3J8G|1|B|G|1444
3J8G|1|B|G|1445
*
3J8G|1|B|U|1466
3J8G|1|B|U|1467
*
3J8G|1|B|A|1525
3J8G|1|B|C|1526
3J8G|1|B|G|1527
3J8G|1|B|A|1528
3J8G|1|B|G|1529
*
3J8G|1|B|U|1542
3J8G|1|B|G|1543
3J8G|1|B|A|1544
3J8G|1|B|A|1545
3J8G|1|B|G|1546
3J8G|1|B|C|1547

Current chains

Chain B

23S rRNA

Nearby chains