J4_3J8G_010

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CUGCCCGGUG*UAAACGGCG*CCUAAGGUAGC*GCACGAAUG

Length

39 nucleotides

Bulged bases

3J8G|1|B|U|1926, 3J8G|1|B|G|1929, 3J8G|1|B|U|1931, 3J8G|1|B|A|1969, 3J8G|1|B|U|1971

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J8G|1|B|C|1833
3J8G|1|B|U|1834
3J8G|1|B|G|1835
3J8G|1|B|C|1836
3J8G|1|B|C|1837
3J8G|1|B|C|1838
3J8G|1|B|G|1839
3J8G|1|B|G|1840
3J8G|1|B|U|1841
3J8G|1|B|G|1842
*
3J8G|1|B|U|1898
3J8G|1|B|A|1899
3J8G|1|B|A|1900
3J8G|1|B|A|1901
3J8G|1|B|C|1902
3J8G|1|B|G|1903
3J8G|1|B|G|1904
3J8G|1|B|C|1905
3J8G|1|B|G|1906
*
3J8G|1|B|C|1924
3J8G|1|B|C|1925
3J8G|1|B|U|1926
3J8G|1|B|A|1927
3J8G|1|B|A|1928
3J8G|1|B|G|1929
3J8G|1|B|G|1930
3J8G|1|B|U|1931
3J8G|1|B|A|1932
3J8G|1|B|G|1933
3J8G|1|B|C|1934
*
3J8G|1|B|G|1964
3J8G|1|B|C|1965
3J8G|1|B|A|1966
3J8G|1|B|C|1967
3J8G|1|B|G|1968
3J8G|1|B|A|1969
3J8G|1|B|A|1970
3J8G|1|B|U|1971
3J8G|1|B|G|1972

Current chains

Chain B

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

GTPase Der