J4_3J92_004

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UCUC*GCCGG*CCACGCGCGCG*CGGCGGAGCGA

Length

31 nucleotides

Bulged bases

3J92|1|5|C|1237

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|U|980
3J92|1|5|C|981
3J92|1|5|U|982
3J92|1|5|C|983
*
3J92|1|5|G|1070
3J92|1|5|C|1071
3J92|1|5|C|1072
3J92|1|5|G|1073
3J92|1|5|G|1074
*
3J92|1|5|C|1236
3J92|1|5|C|1237
3J92|1|5|A|1238
3J92|1|5|C|1239
3J92|1|5|G|1240
3J92|1|5|C|1241
3J92|1|5|G|1242
3J92|1|5|C|1243
3J92|1|5|G|1244
3J92|1|5|C|1245
3J92|1|5|G|1246
*
3J92|1|5|C|1264
3J92|1|5|G|1265
3J92|1|5|G|1266
3J92|1|5|C|1267
3J92|1|5|G|1268
3J92|1|5|G|1269
3J92|1|5|A|1270
3J92|1|5|G|1271
3J92|1|5|C|1272
3J92|1|5|G|1273
3J92|1|5|A|1274

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain E

eL6

Chain F

eL30