J4_3J92_009

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

3J92|1|5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|C|3696
3J92|1|5|U|3697
3J92|1|5|G|3698
*
3J92|1|5|C|3752
3J92|1|5|G|3753
3J92|1|5|G|3754
*
3J92|1|5|U|3770
3J92|1|5|C|3771
3J92|1|5|U|3772
3J92|1|5|U|3773
3J92|1|5|A|3774
3J92|1|5|A|3775
3J92|1|5|G|3776
3J92|1|5|G|3777
3J92|1|5|U|3778
3J92|1|5|A|3779
3J92|1|5|G|3780
*
3J92|1|5|U|3814
3J92|1|5|G|3815
3J92|1|5|A|3816
3J92|1|5|A|3817
3J92|1|5|U|3818
3J92|1|5|G|3819

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 2

Transfer RNA; tRNA

Chain A

uL2