J4_3J9M_002

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA

Length

28 nucleotides

Bulged bases

3J9M|1|A|U|2372, 3J9M|1|A|A|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|A|U|2336
3J9M|1|A|A|2337
3J9M|1|A|A|2338
3J9M|1|A|G|2339
3J9M|1|A|C|2340
3J9M|1|A|C|2341
3J9M|1|A|U|2342
3J9M|1|A|G|2343
3J9M|1|A|C|2344
3J9M|1|A|G|2345
*
3J9M|1|A|C|2368
3J9M|1|A|A|2369
3J9M|1|A|A|2370
3J9M|1|A|U|2371
3J9M|1|A|U|2372
3J9M|1|A|A|2373
3J9M|1|A|A|2374
3J9M|1|A|C|2375
*
3J9M|1|A|G|2421
3J9M|1|A|U|2422
3J9M|1|A|C|2423
3J9M|1|A|A|2424
3J9M|1|A|A|2425
3J9M|1|A|C|2426
3J9M|1|A|C|2427
*
3J9M|1|A|G|2436
3J9M|1|A|C|2437
3J9M|1|A|A|2438

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

bL34m

Chain 9

mL41

Chain U

uL23m

Chain Y

uL29m

Chain s

mL65 (mS30)