J4_3J9M_003

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|A|G|2492
3J9M|1|A|C|2493
3J9M|1|A|C|2494
3J9M|1|A|U|2495
3J9M|1|A|G|2496
*
3J9M|1|A|C|2508
3J9M|1|A|A|2509
3J9M|1|A|U|2510
3J9M|1|A|C|2511
3J9M|1|A|A|2512
3J9M|1|A|C|2513
*
3J9M|1|A|G|2537
3J9M|1|A|C|2538
3J9M|1|A|A|2539
3J9M|1|A|C|2540
3J9M|1|A|C|2541
3J9M|1|A|G|2542
*
3J9M|1|A|C|2637
3J9M|1|A|U|2638
3J9M|1|A|C|2639
3J9M|1|A|C|2640
3J9M|1|A|A|2641
3J9M|1|A|C|2642

Current chains

Chain A

16S rRNA

Nearby chains

Chain A3

mS38

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

uL2m