J4_3J9M_005

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAG*CGUUCCAG*CAC*GAAACAG

Length

22 nucleotides

Bulged bases

3J9M|1|AA|A|700, 3J9M|1|AA|U|711, 3J9M|1|AA|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|AA|C|698
3J9M|1|AA|A|699
3J9M|1|AA|A|700
3J9M|1|AA|G|701
*
3J9M|1|AA|C|708
3J9M|1|AA|G|709
3J9M|1|AA|U|710
3J9M|1|AA|U|711
3J9M|1|AA|C|712
3J9M|1|AA|C|713
3J9M|1|AA|A|714
3J9M|1|AA|G|715
*
3J9M|1|AA|C|800
3J9M|1|AA|A|801
3J9M|1|AA|C|802
*
3J9M|1|AA|G|811
3J9M|1|AA|A|812
3J9M|1|AA|A|813
3J9M|1|AA|A|814
3J9M|1|AA|C|815
3J9M|1|AA|A|816
3J9M|1|AA|G|817

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

mS34

Chain AM

bS16m

Chain AU

mS26

Chain L

uL14m