J4_3J9M_006

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAGUUCACC*GAACA*UAG*CC

Length

19 nucleotides

Bulged bases

3J9M|1|AA|C|722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|AA|G|717
3J9M|1|AA|A|718
3J9M|1|AA|G|719
3J9M|1|AA|U|720
3J9M|1|AA|U|721
3J9M|1|AA|C|722
3J9M|1|AA|A|723
3J9M|1|AA|C|724
3J9M|1|AA|C|725
*
3J9M|1|AA|G|749
3J9M|1|AA|A|750
3J9M|1|AA|A|751
3J9M|1|AA|C|752
3J9M|1|AA|A|753
*
3J9M|1|AA|U|789
3J9M|1|AA|A|790
3J9M|1|AA|G|791
*
3J9M|1|AA|C|797
3J9M|1|AA|C|798

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

mS34

Chain AJ

uS12m

Chain AM

bS16m

Chain AN

uS17m

Chain AT

mS25