J4_3J9W_001

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

3J9W|1|AA|C|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|AA|G|113
3J9W|1|AA|A|114
3J9W|1|AA|G|115
3J9W|1|AA|U|116
3J9W|1|AA|A|117
3J9W|1|AA|A|118
3J9W|1|AA|C|119
3J9W|1|AA|A|120
3J9W|1|AA|C|121
*
3J9W|1|AA|G|246
3J9W|1|AA|G|247
3J9W|1|AA|C|248
*
3J9W|1|AA|G|294
3J9W|1|AA|U|295
3J9W|1|AA|A|296
3J9W|1|AA|G|297
*
3J9W|1|AA|C|319
3J9W|1|AA|C|320

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein uS12

Chain AP

30S ribosomal protein bS16

Chain AQ

30S ribosomal protein uS17