J4_3J9W_002

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAC*GAUGGUUG*CAUAAAAG*CAC

Length

22 nucleotides

Bulged bases

3J9W|1|AA|A|210, 3J9W|1|AA|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|AA|G|141
3J9W|1|AA|A|142
3J9W|1|AA|C|143
*
3J9W|1|AA|G|177
3J9W|1|AA|A|178
3J9W|1|AA|U|179
3J9W|1|AA|G|180
3J9W|1|AA|G|181
3J9W|1|AA|U|182
3J9W|1|AA|U|183
3J9W|1|AA|G|184
*
3J9W|1|AA|C|205
3J9W|1|AA|A|206
3J9W|1|AA|U|207
3J9W|1|AA|A|208
3J9W|1|AA|A|209
3J9W|1|AA|A|210
3J9W|1|AA|A|211
3J9W|1|AA|G|212
*
3J9W|1|AA|C|227
3J9W|1|AA|A|228
3J9W|1|AA|C|229

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein bS20