J4_3J9Z_013

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUAGC*GCAG*CGUGUCC*GU

Length

18 nucleotides

Bulged bases

3J9Z|1|S7|U|8, 3J9Z|1|S7|U|47, 3J9Z|1|S7|C|48

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|S7|A|7
3J9Z|1|S7|U|8
3J9Z|1|S7|A|9
3J9Z|1|S7|G|10
3J9Z|1|S7|C|11
*
3J9Z|1|S7|G|24
3J9Z|1|S7|C|25
3J9Z|1|S7|A|26
3J9Z|1|S7|G|27
*
3J9Z|1|S7|C|43
3J9Z|1|S7|G|44
3J9Z|1|S7|U|45
3J9Z|1|S7|G|46
3J9Z|1|S7|U|47
3J9Z|1|S7|C|48
3J9Z|1|S7|C|49
*
3J9Z|1|S7|G|65
3J9Z|1|S7|U|66

Current chains

Chain S7

E-tRNA

Nearby chains

Chain L2

50S ribosomal protein L33

Chain SG

30S ribosomal protein S7