J4_3JA1_010

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAG*UUGAC*GGUG*CAGG

Length

18 nucleotides

Bulged bases

3JA1|1|LA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|LA|C|2285
3JA1|1|LA|G|2286
3JA1|1|LA|A|2287
3JA1|1|LA|A|2288
3JA1|1|LA|G|2289
*
3JA1|1|LA|U|2343
3JA1|1|LA|U|2344
3JA1|1|LA|G|2345
3JA1|1|LA|A|2346
3JA1|1|LA|C|2347
*
3JA1|1|LA|G|2370
3JA1|1|LA|G|2371
3JA1|1|LA|U|2372
3JA1|1|LA|G|2373
*
3JA1|1|LA|C|2380
3JA1|1|LA|A|2381
3JA1|1|LA|G|2382
3JA1|1|LA|G|2383

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L4

50S ribosomal protein L33

Chain L6

50S ribosomal protein L35

Chain LQ

50S ribosomal protein L18

Chain LY

50S ribosomal protein L27